GSM327665 GSE13084 hES_EZH2_ChIPSeq EZH2 GSM327666 GSE13084 hES_RING1B_ChIPSeq RING1B GSM807403 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H3T11ph in hESC H9 Cells; renlab.H3T11ph.hESC.H9.01.01 H3 GSM667619 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H3K23ac in hESC H9 Cells; renlab.H3K23ac.hESC.H9.01.01 no H3K23ac, Millipore, 07-355, 27133 GSM667640 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H4K91ac in hESC H9 Cells; renlab.H4K91ac.hESC.H9.02.01 no H4K91ac, Abcam, ab4627, 82963 GSM605307 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H3K27ac in hESC H9 Cells; renlab.H3K27ac.hESC.H9.01.01 H3K27ac GENOME_ NCBI Build GRCh37/UCSC Build hg19,GENOME_ NCBI Build GRCh37/UCSC Build hg19, GSM665037 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H3K27ac in hESC H9 Cells; renlab.H3K27ac.hESC.H9.02.01 H3K27ac GSM667643 GSE16256 Reference Epigenome: ChIP-Seq Input from hESC H9 Cells; renlab.Input.hESC.H9.01.01 input GENOME_ NCBI Build GRCh37/UCSC Build hg19,GENOME_ NCBI Build GRCh37/UCSC Build hg19, GSM667639 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H4K91ac in hESC H9 Cells; renlab.H4K91ac.hESC.H9.01.01 no H4K91ac, Abcam, ab4627, 82963 GSM667626 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H3K4me1 in hESC H9 Cells; renlab.H3K4me1.hESC.H9.01.01 H3K4me1 GSM832839 GSE16256 ChIP-seq Input in H9 cells; renlab.Input.hESC.H9.07 input GSM706071 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H3K4me1 in hESC H9 Cells; renlab.H3K4me1.hESC.H9.02.01 H3K4me1 GSM667621 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H3K23me2 in hESC H9 Cells; renlab.H3K23me2.hESC.H9.01.01 no H3K23me2, Abcam, ab2370, 13694 GSM807391 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H2A.Z in hESC H9 Cells; renlab.H2A.Z.hESC.H9.01.01 H2AZ GSM667620 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H3K23ac in hESC H9 Cells; renlab.H3K23ac.hESC.H9.02.01 no H3K23ac, Millipore, 07-355, 27133 GSM807396 GSE16256 Reference Epigenome: ChIP-Seq Analysis of H3K23me2 in hESC H9 Cells; renlab.H3K23me2.hESC.H9.02.01 no H3K23me2, Abcam, ab2370, 13694 GSM706081 GSE16256 Reference Epigenome: ChIP-Seq Input from hESC H9 Cells; renlab.Input.hESC.H9.02.01 input GSM878612 GSE18927 Chromatin accessibility assay of H9 Cell Line; DS18517 DHS GENOME_ NCBI Build GRCh37/UCSC Build hg19,GENOME_ NCBI Build GRCh37/UCSC Build hg19, GSM878613 GSE18927 Chromatin accessibility assay of H9 Cell Line; DS18522 DHS GENOME_ NCBI Build GRCh37/UCSC Build hg19,GENOME_ NCBI Build GRCh37/UCSC Build hg19, GSM470914 GSE19046 H9 ES MNase-digested chromatin vs. bare genomic DNA no MNase GSM761754 GSE19461 hESC_Input_XL input GSM761758 GSE19461 hESC_D3_Smad_XL_rep2 GSM761754 SMAD2-3 GSM761755 GSE19461 hESC_D0_Smad_XL_rep1 GSM761754 SMAD2-3 GSM761756 GSE19461 hESC_D0_Smad_XL_rep2 GSM761754 SMAD2-3 GSM761757 GSE19461 hESC_D3_Smad_XL_rep1 GSM761754 SMAD2-3 GSM545201 GSE21916 H9 IgG input GSM545203 GSE21916 H9 Oct4 technical replicate 1 GSM545201 Oct4 GSM545202 GSE21916 H9 Oct4 replicate 2 GSM545201 Oct4 GSM545204 GSE21916 H9 Oct4 technical replicate 2 GSM545201 Oct4 GSM602291 GSE24447 ESC_p300 GSM602292 EP300 GSM602292 GSE24447 ESC_input input GSM602295 GSE24447 ESC_H3K4me1 GSM602292 H3K4me1 GSM602297 GSE24447 ESC_BRG1 GSM602292 BRG1 GSM602294 GSE24447 ESC_H3K27ac GSM602292 H3K27ac GSM602298 GSE24447 ESC_FAIRE FAIRE GSM640690 GSE26097 hESC_Input_XL_ChIP-Seq input GSM640691 GSE26097 hESC_48h-endodiff_EOMES_XL_ChIP-Seq_reps1and2 GSM640690 EOMES GSM727580 GSE29422 hESC input DNA pool (for histone modifications) input GSM727561 GSE29422 hESC SMAD4 ChIP-Seq rep1 GSM727569 SMAD4 GSM727584 GSE29422 Endoderm SMAD2/3 B ChIP-Seq rep1 GSM727593 SMAD2-3 GSM727585 GSE29422 Endoderm SMAD3 ChIP-Seq rep1 GSM727593 SMAD3 GSM727586 GSE29422 Endoderm SMAD4 ChIP-Seq rep1 GSM727593 SMAD4 GSM727569 GSE29422 hESC input DNA pool input GSM727593 GSE29422 Endoderm input DNA pool input GSM727559 GSE29422 hESC SMAD3 ChIP-Seq rep1 GSM727569 SMAD3 GSM727583 GSE29422 Endoderm SMAD2/3 A ChIP-Seq pool GSM727593 SMAD2/3 GSM727558 GSE29422 hESC SMAD2/3 B ChIP-Seq rep1 GSM727569 SMAD2/3 GSM727589 GSE29422 Endoderm FOXH1 ChIP-Seq pool GSM727593 FOXH1 GSM727604 GSE29422 Endoderm input DNA pool (for histone modifications) input GSM727557 GSE29422 hESC SMAD2/3 A ChIP-Seq pool GSM727569 SMAD2/3 GSM727564 GSE29422 hESC FOXH1 ChIP-Seq pool GSM727569 FOXH1 GSM768311 GSE30992,GSE31006 FOXP1_ChIP-Seq_2 GSM768313 FOXP1 GSM768310 GSE30992,GSE31006 FOXP1_ChIP-Seq_1 GSM768312 FOXP1 GSM768313 GSE30992,GSE31006 WCE_2 input GSM768312 GSE30992,GSE31006 WCE_1 input GSM816629 GSE32970,GSE51334 Duke_DnaseSeq_H9ES DHS GSM981237 GSE39912 Differentiating_p53_ChIPSeq GSE39912 p53 hg18, GSM981235 GSE39912 Untreated_p53_ChIPSeq GSE39912 p53 hg18, GSM981238 GSE39912 input DNA input hg18, GSM981236 GSE39912 Damaged_p53_ChIPSeq GSE39912 p53 hg18, GSM1139041 GSE46837 H9_SOX2_AF2018 GSM1139040 SOX2 hg18, GSM1139040 GSE46837 H9_input input hg18, GSM1194221 GSE49140 MNase-Seq H9 MNase hg19, GSM1338280 GSE55502 Input_ES_M input hg19, hg19, GSM1340952 GSE55502 Input_ES_G1_K4_R2 input hg19, GSM1338281 GSE55502 Input_ES_G1 input hg19, hg19, GSM1338279 GSE55502 Input_ES_G2 input hg19, hg19, GSM1466842 GSE60171 Human ESCs PolII MS417- treated 6h 10 GSM1466834 POL2 hg19, GSM1466838 GSE60171 Human ESCs BRD2 MS417- treated 6h 08 GSM1466834 BRD2 hg19, GSM1466836 GSE60171 Human ESCs BRD4 MS417- treated 6h (rep1+rep2) GSM1466834 BRD4 hg19, GSM1466840 GSE60171 Human ESCs BRD3 MS417- treated 6h 10 GSM1466834 BRD3 hg19, GSM1466834 GSE60171 Human ESCs IgG MS417- treated 6h 02 input hg19, GSM1483191 GSE60606 BRA_FLyB_ChIPseq_RD GSM1483195 BRACHYURY hg19, GSM1483190 GSE60606 BRA_FLyA_ChIPseq_RD GSM1483194 BRACHYURY hg19, GSM1483195 GSE60606 BRA_FLyB_Input input hg19, GSM1483193 GSE60606 BRA_FLyB_ChIPseq_SC GSM1483195 BRACHYURY hg19, GSM1483194 GSE60606 BRA_FLyA_Input input hg19, GSM1483192 GSE60606 BRA_FLyA_ChIPseq_SC GSM1483194 BRACHYURY hg19, GSM1521726 GSE62193 ESC_rep2_H3K27ac GSM1521725 Histone hg19, GSM1521721 GSE62193 ESC_rep1_H3K27ac GSM1521725 Histone hg19, GSM1521723 GSE62193 ESC_rep1_H3K4me1 GSM1521725 Histone hg19, GSM1521725 GSE62193 ESC_rep1_WCE input hg19, GSM1521728 GSE62193 ESC_rep2_H3K4me1 GSM1521725 Histone hg19, GSM1528892 GSE62562 input_H9_XaXe input hg19, GSM1528891 GSE62562 input_H9_XaXi input hg19, GSM1537612 GSE62983 H9 NANOG GSM1537613 NANOG HG19, GSM1537611 GSE62983 H9 OCT4 GSM1537613 OCT4 HG19, GSM1537610 GSE62983 H9 SOX2 GSM1537613 SOX2 HG19, GSM1537613 GSE62983 H9 IgG input HG19, GSM1701827 GSE69479 hESC Input input hg19, GSM1701826 GSE69479 hESC POI II ChIP-seq GSM1701827 POL2 hg19, GSM1701825 GSE69479 hESC SOX2 ChIP-Seq GSM1701827 SOX2 hg19, GSM1901446 GSE73725 input control for ChIP-seq input hg19, GSM1901445 GSE73725 Nanog ChIP-seq GSM1901446 Nanog hg19, GSM2028274 GSE76586 ChIP-seq_UBTF_hESC GSM2028277 UBTF mRNA-seq = hg19, ChIP-seq = hg18plusrDNA custom build, GSM2028276 GSE76586 ChIP-seq_IgG_hESC input mRNA-seq = hg19, ChIP-seq = hg18plusrDNA custom build, GSM2028277 GSE76586 ChIP-seq_Input_hESC input mRNA-seq = hg19, ChIP-seq = hg18plusrDNA custom build, GSM2028275 GSE76586 ChIP-seq_UBTF_6hr_ActivinA GSM2028277 UBTF mRNA-seq = hg19, ChIP-seq = hg18plusrDNA custom build,